FreeBSD/ports 5df3619security/putty distinfo Makefile, security/putty/files patch-utils_subprocess__waiter.c

security/putty: Update to 0.84

Changelog: https://www.chiark.greenend.org.uk/~sgtatham/putty/changes.html

PR:     295501
Sponsored by:   Netzkommune GmbH

(cherry picked from commit 7c5dcd59e0ad4cd9050a5e5704c54fc20f4f66ec)
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+10-0security/putty/files/patch-utils_subprocess__waiter.c
+3-3security/putty/distinfo
+1-3security/putty/Makefile
+14-63 files

FreeBSD/ports 5198667biology/TrimGalore distinfo Makefile.crates, biology/TrimGalore/files trim_galore-test.in

biology/p5-TrimGalore: update 0.6.11->2.2.0 and move to biology/TrimGalore

Changelog:
    https://github.com/FelixKrueger/TrimGalore/releases/tag/v2.1.0
    https://github.com/FelixKrueger/TrimGalore/releases/tag/v2.2.0

Since v2 TrimGalore was rewrote in Rust, the migration notes give
details about what stays the same and what's new in v2.

https://www.trimgalore.com/reference/migration/

Major changes;
    * not a perl port anymore
    * no dependency (FastQC bundled via fastqc-rust)

Take maintainership for this port
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+471-0biology/TrimGalore/distinfo
+234-0biology/TrimGalore/Makefile.crates
+0-33biology/p5-TrimGalore/Makefile
+0-24biology/p5-TrimGalore/pkg-plist
+18-0biology/TrimGalore/Makefile
+13-0biology/TrimGalore/files/trim_galore-test.in
+736-577 files not shown
+741-7613 files

FreeBSD/ports 7c5dcd5security/putty distinfo Makefile, security/putty/files patch-utils_subprocess__waiter.c

security/putty: Update to 0.84

Changelog: https://www.chiark.greenend.org.uk/~sgtatham/putty/changes.html

PR:     295501
Sponsored by:   Netzkommune GmbH
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+10-0security/putty/files/patch-utils_subprocess__waiter.c
+3-3security/putty/distinfo
+1-3security/putty/Makefile
+14-63 files

FreeBSD/ports 17bd36fsecurity/vuxml/vuln 2026.xml

security/vuxml: Add entry for putty

PR:     295501
Sponsored by:   Netzkommune GmbH
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+33-0security/vuxml/vuln/2026.xml
+33-01 files

LLVM/project 118bcb3

[NFC] Reland "[llvm-ir2vec] Place IR2Vec Python bindings in the tools/llvm-ir2vec/Bindings build directory (#194301)" (#198752)
DeltaFile
+0-00 files

FreeBSD/ports a5596c1. MOVED, www Makefile

www/rubygem-deckar01-task_list-gitlab: Remove expired port

www/rubygem-deckar01-task_list-gitlab
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+0-20www/rubygem-deckar01-task_list-gitlab/Makefile
+0-3www/rubygem-deckar01-task_list-gitlab/distinfo
+0-2www/rubygem-deckar01-task_list-gitlab/pkg-descr
+1-0MOVED
+0-1www/Makefile
+1-265 files

FreeBSD/ports 0d6e25fports-mgmt/portgrep distinfo Makefile

ports-mgmt/portgrep: update to 1.4.2 release

This is a fork of the original package with a few fixes and some
new features requested by current users.
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+5-5ports-mgmt/portgrep/distinfo
+3-4ports-mgmt/portgrep/Makefile
+8-92 files

FreeBSD/ports e0aeeb8. MOVED, devel Makefile

devel/rubygem-rugged17: Remove expired port

devel/rubygem-rugged17
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+0-30devel/rubygem-rugged17/Makefile
+0-3devel/rubygem-rugged17/distinfo
+0-1devel/Makefile
+1-0MOVED
+0-1devel/rubygem-rugged17/pkg-descr
+1-355 files

NetBSD/pkgsrc aVXgnqmdoc CHANGES-2026

   Updated misc/py-icecream, sysutils/fabric, security/py-paramiko; Removed devel/py-pathlib[2]
VersionDeltaFile
1.3216+6-1doc/CHANGES-2026
+6-11 files

FreeBSD/ports 52b5781net/gotify-server Makefile

net/gotify-server: enable only for amd64

Npm cache file only produced for amd64 arch.
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+2-1net/gotify-server/Makefile
+2-11 files

NetBSD/pkgsrc yl7Bilzdevel Makefile, devel/py-pathlib Makefile PLIST

   py-pathlib: removed; included in Python 3.4 onwards; no longer needed in pkgsrc
VersionDeltaFile
1.4631+1-3devel/Makefile
1.3+1-1devel/py-pathlib/Makefile
1.4+1-1devel/py-pathlib/PLIST
1.5+1-1devel/py-pathlib/distinfo
1.2+0-0devel/py-pathlib/DESCR
+4-65 files

NetBSD/pkgsrc oa1lDnAdevel/py-pathlib2 PLIST Makefile

   py-pathlib2: removed; used to provide Python 2.7 compatibility which is outdated
VersionDeltaFile
1.4+1-1devel/py-pathlib2/PLIST
1.15+1-1devel/py-pathlib2/Makefile
1.12+1-1devel/py-pathlib2/distinfo
1.2+0-0devel/py-pathlib2/DESCR
+3-34 files

NetBSD/pkgsrc ixKO6Thdevel/py-setuptools44 Makefile

   py-setuptools44: removed commented-out TEST_DEPENDS
VersionDeltaFile
1.9+1-7devel/py-setuptools44/Makefile
+1-71 files

NetBSD/pkgsrc XZpL45Ssecurity/py-paramiko Makefile PLIST

   py-paramiko: updated to 5.0.0

   5.0.0

   [Feature]: Added a new, optional file_format keyword argument to PKey.write_private_key and PKey.write_private_key_file to allow writing out OpenSSH-style private key files in addition to the legacy PEM format.

   Warning
   While the default format remains PEM in Paramiko 5, future major releases are likely to change that default to the OpenSSH format. We recommend updating any key-writing code you have to be explicit now, to insulate yourself from such an update.
   [Bug]: Added a password kwarg to PKey.from_type_string so it can handle encrypted keys like most other PKey constructors already could.

   [Bug]: Fix Ed25519Key’s internals such that it no longer throws AttributeError during calls to __repr__ when only partly initialized. This isn’t a normal runtime problem (it only happens inside error handling for fatal errors like “not a valid private key”) but was perennially complicating test failure diagnosis and similar scenarios.

   [Support]: Removed the demos/ folder; they’ve become too big a support burden and we’ve wanted to remove them for years.

   Users who enjoyed the client-side demos should look at our wrapper library, Fabric.

   We suspect the most-used demo was demos/demo-server.py and may consider adding a variant of it to the actual Python package in future.

   [Support]: Renamed PKey.from_path’s passphrase argument to password so it’s consistent with all the other methods of instantiating PKey objects.

    [24 lines not shown]
VersionDeltaFile
1.63+5-7security/py-paramiko/Makefile
1.23+1-10security/py-paramiko/PLIST
1.39+4-4security/py-paramiko/distinfo
+10-213 files

LLVM/project dd1649blibc/src/__support/macros optimization.h, libc/test/UnitTest FPMatcher.h

[libc][NFC] Make LIBC_MATH safer and some minor improvements for floating point exception tests. (#199392)

- Wrap LIBC_MATH usages inside parentheses
- Skip clearing exceptions when not needed.
- Skip FE_INEXACT when testing FE_UNDERFLOW / FE_OVERFLOW for basic ops.
DeltaFile
+58-28libc/test/UnitTest/FPMatcher.h
+26-36libc/test/src/math/smoke/SubTest.h
+26-36libc/test/src/math/smoke/MulTest.h
+24-32libc/test/src/math/smoke/DivTest.h
+21-26libc/test/src/math/smoke/AddTest.h
+5-5libc/src/__support/macros/optimization.h
+160-1635 files not shown
+167-17011 files

NetBSD/pkgsrc 366ODVssysutils/fabric Makefile PLIST

   fabric: updated to 3.2.3

   3.2.2

   [Bug]: fabric.runners.Remote failed to properly deregister its SIGWINCH signal handler on shutdown; in rare situations this could cause tracebacks when the Python process receives SIGWINCH while no remote session is active. This has been fixed.
   [Bug] 2204: The signal handling functionality added in Fabric 2.6 caused unrecoverable tracebacks when invoked from inside a thread (such as the use of fabric.group.ThreadingGroup) under certain interpreter versions. This has been fixed by simply refusing to register signal handlers when not in the main thread. Thanks to Francesco Giordano and others for the reports.
VersionDeltaFile
1.60+10-10sysutils/fabric/Makefile
1.20+10-7sysutils/fabric/PLIST
1.35+4-4sysutils/fabric/distinfo
+24-213 files

NetBSD/pkgsrc IiLlDuXmisc/py-icecream distinfo Makefile

   py-icecream: updated to 2.2.0

   2.2.0

   Added: noColor option for configureOutput, which disables colored output. It is set to False by default.
VersionDeltaFile
1.8+4-4misc/py-icecream/distinfo
1.9+2-2misc/py-icecream/Makefile
+6-62 files

NetBSD/pkgsrc NundZXQdatabases/py-pickleshare PLIST Makefile

   py-pickleshare: converted to wheel.mk
VersionDeltaFile
1.2+6-6databases/py-pickleshare/PLIST
1.5+4-8databases/py-pickleshare/Makefile
+10-142 files

LLVM/project 0ee8a37llvm/lib/Target/X86 X86ISelLowering.cpp, llvm/test/CodeGen/X86 ldexp-avx512.ll fold-int-pow2-with-fmul-or-fdiv.ll

[X86] LowerFLDEXP: convert widened int exponent to FP before SCALEF (#199263)

For vector ldexp cases that LowerFLDEXP implements by widening to a
512-bit SCALEF operation, the code widened both X and Exp but passed
the widened integer exponent directly to SCALEF, which interprets
its inputs as IEEE-754 floats.

Convert the widened integer exponent to FP and pass that to SCALEF.

Reproducer (clang -O2 -mavx512f repro.c -o repro && ./repro):

```
  #include <stdio.h>
  typedef float v4f __attribute__((vector_size(16)));
  typedef int v4i __attribute__((vector_size(16)));

  __attribute__((noinline))
  v4f ldexp_v4(v4f x, v4i e) {
    return __builtin_elementwise_ldexp(x, e);

    [22 lines not shown]
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+30-17llvm/test/CodeGen/X86/ldexp-avx512.ll
+11-3llvm/lib/Target/X86/X86ISelLowering.cpp
+2-0llvm/test/CodeGen/X86/fold-int-pow2-with-fmul-or-fdiv.ll
+43-203 files

NetBSD/pkgsrc KykLnd7doc CHANGES-2026

   Updated security/adguardhome, devel/py-cython, devel/py-test-codspeed, devel/py-bumpver
VersionDeltaFile
1.3215+5-1doc/CHANGES-2026
+5-11 files

NetBSD/pkgsrc KlD5r06devel/py-bumpver Makefile distinfo

   py-bumpver: updated to 2026.1132

   2026.1132

   - Add `allowed_branches` config option to restrict which branches can be released from. Accepts a comma-separated list of glob patterns (e.g. `master,main,release-*`). Empty (the default) allows any branch.
VersionDeltaFile
1.12+3-6devel/py-bumpver/Makefile
1.7+4-4devel/py-bumpver/distinfo
+7-102 files

NetBSD/pkgsrc V61MT0rdevel/py-test-codspeed distinfo Makefile

   py-test-codspeed: updated to 5.0.3

   5.0.3
   chore: move callgrind skip obj API to instrument-hooks
VersionDeltaFile
1.11+4-4devel/py-test-codspeed/distinfo
1.13+2-2devel/py-test-codspeed/Makefile
+6-62 files

NetBSD/pkgsrc d9506nfdevel/py-cython Makefile distinfo

   py-cython: updated to 3.2.5

   3.2.5 (2026-05-23)

   Bugs fixed

   * A compile failure was fixed when using the walrus operator inside of try-except.
   * Expressions with side-effects as object argument to ``isinstance()`` could get
     evaluated multiple times, e.g. when they use the walrus operator.
   * Several problems generating the shared utility module were resolved, including
     a performance regression with memory views.
   * Some GC and refcounting issues were resolved for Cython functions in the Limited API.
   * Refcounting errors and error handling issues were resolved in some rare error handling cases.
   * Using ``cython.pymutex`` in an extension type with ``cdef`` methods generated
     invalid C code missing the required ``PyMutex`` declarations.
   * Calling ``.get_frame()`` on Cython coroutines could crash in freethreading Python.
   * The vectorcall protocol was not used correctly in ``.throw()`` of Cython coroutines
     when raising the exception only by type (without value or traceback).
   * A problem with cpdef enums in the Limited API of Python 3.11+ was resolved.

    [20 lines not shown]
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1.116+4-8devel/py-cython/Makefile
1.97+4-4devel/py-cython/distinfo
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NetBSD/pkgsrc nKPTyDdsecurity/adguardhome distinfo go-modules.mk

   adguardhome: updated to 0.107.76

   0.107.76

   Changed

   Duration values in YAML configuration file now support d (days) units and has been updated.
   NOTE: Any rollback to version below the v0.107.76 should convert the values back to hours.

   Fixed

   DNS caching with disabled DNSSEC
VersionDeltaFile
1.9+19-19security/adguardhome/distinfo
1.7+4-4security/adguardhome/go-modules.mk
1.17+2-2security/adguardhome/Makefile
+25-253 files

LLVM/project 7e2d09dclang/test/Headers __clang_hip_math.hip, llvm/test/Analysis/CostModel/X86 reduce-smax.ll reduce-smin.ll

Merge branch 'main' into users/spavloff/snan
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+647-736clang/test/Headers/__clang_hip_math.hip
+591-509llvm/test/FileCheck/dump-input/annotations.txt
+607-0llvm/test/CodeGen/RISCV/GlobalISel/irtranslator/fixed-vectors-calling-conv.ll
+150-150llvm/test/Analysis/CostModel/X86/reduce-smax.ll
+150-150llvm/test/Analysis/CostModel/X86/reduce-smin.ll
+150-150llvm/test/Analysis/CostModel/X86/reduce-umax.ll
+2,295-1,695337 files not shown
+7,379-4,198343 files

LLVM/project 78cbf39compiler-rt/lib/builtins atomic.c, compiler-rt/test/builtins/Unit atomic_test.c

[compiler-rt] Use `size_t` rather than `int` for first argument to `__atomic_load_c` et al. (#197519)

I noticed this discrepancy in emscripten when trying to test 128 bit
atomics under wasm64:
https://github.com/emscripten-core/emscripten/pull/26937

The LLVM CodeGen appears to use `size_t` in this position when it
generates calls to these functions.

This doesn't effect other platforms I imagine because they don't require
signature checking at the linker level.

This doesn't effect wasm32 where size_t and int are the same size.
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+5-4compiler-rt/lib/builtins/atomic.c
+11-102 files

FreeBSD/ports c281eb7sysutils/virt-firmware distinfo Makefile

sysutils/virt-firmware: update to 26.5.4
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+2-3sysutils/virt-firmware/Makefile
+5-62 files

LLVM/project c06755ebolt/lib/Profile DataAggregator.cpp

pj

Created using spr 1.3.4
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+2-21 files

LLVM/project b9a1e89bolt/lib/Profile DataAggregator.cpp

pj

Created using spr 1.3.4
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+7-2bolt/lib/Profile/DataAggregator.cpp
+7-21 files

LLVM/project 02f7369libcxx/include __verbose_trap

[libc++] Remove AppleClang woraround for __builtin_verbose_trap (#199171)

We've dropped support for AppleClang versions with a different
`__builtin_verbose_trap`, so we can remove the workaround.
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+1-81 files