biology/bcftools: Update to 1.23.1
A few bug fixes, though more changes to underlying htslib
Changes: https://github.com/samtools/bcftools/releases
New commands: gff2gff and roh-viz
themes: add "opnsense-auto" which switches between "opnsense" and "opnsense-dark" depending browser settings, inspired by https://github.com/opnsense/core/pull/9916
It's a bit of an experiment, but since its so small, it shouldn't be an issue to push this to master.
The trick is actually pretty simple, symlink the relevant directories in build to the standard opnsense theme and add a theme.js override to handle the logic.
bluetooth: add device IDs for Intel AX411 and BE200 adapters
Add USB product IDs for Intel AX411 (0x0035) and BE200 (0x0036)
Bluetooth adapters to ng_ubt_intel, ng_ubt, iwmbtfw, and iwmbtfw.conf.
Both chips use the same TLV-based firmware protocol as the existing
9260/9560 entries. Newer Blazar-generation chips (BE201, BE202,
Whale Peak 2) are omitted as they require IML support not yet
implemented in iwmbtfw.
Signed-off-by: Christos Longros <chris.longros at gmail.com>
Reviewed by: wulf
MFC after: 1 week
Differential Revision: https://reviews.freebsd.org/D56122
hkbd(4): add some extra handy fn key bindings
- Fn+S for ScrollLock as it's very useful to have ScrollLock on
FreeBSD's TTY.
- Fn+P for PrtSc/SysRq, as it's another very handy but sadly missing
key on Macbooks.
- Some other Fn+<key> combinations duplicating existing keys.
Apply the change to ukbd(4) as well.
Signed-off-by: Toby Slight <tslight at pm.me>
Reviewed by: wulf
MFC after: 1 month
Pull Request: https://github.com/freebsd/freebsd-src/pull/1998
[NFC][AArch64] update tests for `is_fpclass` (#187336)
Hopefully this is better.
One wrinkle is that `@llvm.is.fpclass.bf16` is not currently implemented
for GI. That might be easy to add but I've not been able to figure out
where the issue is exactly so far.
I'm also not totally sure `-mattr=-fp-armv8` is equivalent to softfloat,
but some tests do suggest that they are equivalent (and looking at the
assembly, that seems right).
[DA] Fix overflow of calculation in weakCrossingSIVtest
This patch fixes a correctness issue where integer overflow in the
upper bound calculation of weakCrossingSIVtest caused the pass to
incorrectly prove independence.
The previous logic used `SCEV::getMulExpr` to calculate
`2 * ConstCoeff * UpperBound` and compared it to `Delta` using
`isKnownPredicate`. In the presence of overflow, this could yield
unsafe results.
This change replaces the SCEV arithmetic with `ConstantRange` and
its operation (`smul_fast`). If the calculation overflows,
`intersectWith(MLRange).isEmptySet()` would be false, ensures we
conservatively assume a dependence if the bounds cannot be proven
safe.
Signed-off-by: Ruoyu Qiu <cabbaken at outlook.com>
security/nmap*: Actually use devel/pcre2
devel/pcre2 is specified as a dependency but not used. Instead nmap
uses its own pcre2, which is missing symbols from its symbol table.
This is not a problem with 16-CURRENT but 15-RELEASE-p2 fails to build.
We fix this by using the pcre2 provided by ports.
PR: 294112
