sra-tools: Update to 3.2.1 Fix fasterq-dump mkdir error: https://github.com/ncbi/sra-tools/issues/1016#issuecomment-2737694569 Numerous other fixes and enhancements Changes: https://github.com/ncbi/sra-tools/commits/master/
| Delta | File | |
|---|---|---|
| +6 | -6 | biology/sra-tools/distinfo |
| +1 | -1 | biology/sra-tools/Makefile |
| +7 | -7 | 2 files |
e2fsprogs: Fixes for Linux.
| Delta | File | |
|---|---|---|
| +25 | -0 | sysutils/e2fsprogs/patches/patch-scrub_Makefile.in |
| +2 | -0 | sysutils/e2fsprogs/Makefile |
| +1 | -0 | sysutils/e2fsprogs/distinfo |
| +28 | -0 | 3 files |
tarsnap: Update to 1.0.41
| Delta | File | |
|---|---|---|
| +5 | -2 | sysutils/tarsnap/Makefile |
| +3 | -3 | sysutils/tarsnap/distinfo |
| +8 | -5 | 2 files |
tarsnap: Update COMMENT (trigger rebuild)
| Delta | File | |
|---|---|---|
| +1 | -1 | sysutils/tarsnap/Makefile |
| +1 | -1 | 1 files |
sra-tools: Update to 3.2.1 (#99) Fix fasterq-dump mkdir error: https://github.com/ncbi/sra-tools/issues/1016#issuecomment-2737694569 Numerous other fixes and enhancements Changes: https://github.com/ncbi/sra-tools/commits/master/
| Delta | File | |
|---|---|---|
| +6 | -6 | biology/sra-tools/distinfo |
| +1 | -1 | biology/sra-tools/Makefile |
| +7 | -7 | 2 files |
e2fsprogs: Fix PLIST on Linux
| Delta | File | |
|---|---|---|
| +2 | -0 | sysutils/e2fsprogs/Makefile |
| +2 | -0 | 1 files |
e2fsprogs: Avoid stripping scripts.
| Delta | File | |
|---|---|---|
| +25 | -0 | sysutils/e2fsprogs/patches/patch-scrub_Makefile.in |
| +1 | -0 | sysutils/e2fsprogs/distinfo |
| +26 | -0 | 2 files |
e2fsprogs: Disable strip.
| Delta | File | |
|---|---|---|
| +3 | -0 | sysutils/e2fsprogs/Makefile |
| +3 | -0 | 1 files |
tarsnap: Depend on e2fsprogs on Linux
| Delta | File | |
|---|---|---|
| +4 | -0 | sysutils/tarsnap/Makefile |
| +4 | -0 | 1 files |
tarsnap: Update to 1.0.41
| Delta | File | |
|---|---|---|
| +3 | -3 | sysutils/tarsnap/distinfo |
| +1 | -2 | sysutils/tarsnap/Makefile |
| +4 | -5 | 2 files |
expat: Update to 2.7.0 Fixes CVE-2024-8176.
| Delta | File | |
|---|---|---|
| +0 | -41 | textproc/expat/patches/patch-cmake_autotools_expat-noconfig____macos.cmake.in |
| +3 | -4 | textproc/expat/distinfo |
| +1 | -4 | textproc/expat/Makefile |
| +4 | -49 | 3 files |
memcached: Update to 1.6.38 This is just a few bug fix releases into the future.
| Delta | File | |
|---|---|---|
| +3 | -3 | devel/memcached/distinfo |
| +1 | -1 | devel/memcached/Makefile |
| +4 | -4 | 2 files |
janet: Update to 1.38.0
| Delta | File | |
|---|---|---|
| +25 | -0 | lang/janet/patches/patch-src_core_net.c |
| +7 | -1 | lang/janet/Makefile |
| +4 | -3 | lang/janet/distinfo |
| +1 | -1 | lang/janet/PLIST |
| +37 | -5 | 4 files |
janet: Fix previous.
| Delta | File | |
|---|---|---|
| +3 | -3 | lang/janet/Makefile |
| +3 | -3 | 1 files |
janet: attempt to fix sunos build, part 2
| Delta | File | |
|---|---|---|
| +4 | -0 | lang/janet/Makefile |
| +4 | -0 | 1 files |
janet: Attempt to fix the build on SunOS
| Delta | File | |
|---|---|---|
| +3 | -0 | lang/janet/Makefile |
| +3 | -0 | 1 files |
imlib2: Update to 1.12.4
| Delta | File | |
|---|---|---|
| +3 | -3 | graphics/imlib2/distinfo |
| +1 | -2 | graphics/imlib2/Makefile |
| +4 | -5 | 2 files |
janet: Update to 1.38.0
| Delta | File | |
|---|---|---|
| +3 | -3 | lang/janet/distinfo |
| +1 | -1 | lang/janet/PLIST |
| +1 | -1 | lang/janet/Makefile |
| +5 | -5 | 3 files |
git-base: rm redundant line (trigger rebuild)
| Delta | File | |
|---|---|---|
| +0 | -1 | devel/git-base/Makefile |
| +0 | -1 | 1 files |
git: Update to 2.49.0
| Delta | File | |
|---|---|---|
| +3 | -3 | devel/git-base/distinfo |
| +2 | -1 | devel/git-base/PLIST |
| +2 | -1 | devel/git-docs/PLIST |
| +1 | -1 | devel/git/Makefile.version |
| +8 | -6 | 4 files |
curl: Disable http2 on cygwin.
| Delta | File | |
|---|---|---|
| +10 | -2 | www/curl/options.mk |
| +10 | -2 | 1 files |
mk: Switch KRB5_DEFAULT default to mit-krb5. More OS include this than heimdal, and for OS that do not provide either, building the pkgsrc version is a lot more portable. Retain heimdal as the default on NetBSD and FreeBSD.
| Delta | File | |
|---|---|---|
| +1 | -5 | mk/platform/SunOS.mk |
| +0 | -3 | mk/platform/Darwin.mk |
| +3 | -0 | mk/platform/FreeBSD.mk |
| +0 | -3 | mk/platform/HPUX.mk |
| +3 | -0 | mk/platform/NetBSD.mk |
| +1 | -1 | mk/krb5.buildlink3.mk |
| +8 | -12 | 6 files |
git: Update to 2.49.0
| Delta | File | |
|---|---|---|
| +3 | -3 | devel/git-base/distinfo |
| +2 | -1 | devel/git-base/PLIST |
| +2 | -1 | devel/git-docs/PLIST |
| +1 | -1 | devel/git/Makefile.version |
| +8 | -6 | 4 files |
py-numpy: bump
| Delta | File | |
|---|---|---|
| +0 | -1 | math/py-numpy/Makefile |
| +0 | -1 | 1 files |
gcc14-libs: fix
| Delta | File | |
|---|---|---|
| +1 | -1 | lang/gcc14-libs/buildlink3.mk |
| +1 | -1 | 1 files |
py-numpy: bump
| Delta | File | |
|---|---|---|
| +1 | -0 | math/py-numpy/Makefile |
| +1 | -0 | 1 files |
mk: Move OPSYSVARS evaluation to last.
| Delta | File | |
|---|---|---|
| +15 | -13 | mk/bsd.pkg.mk |
| +15 | -13 | 1 files |
gcc14-libs: fix rpath
| Delta | File | |
|---|---|---|
| +1 | -1 | lang/gcc14-libs/buildlink3.mk |
| +1 | -1 | 1 files |
py-numpy: trigger
| Delta | File | |
|---|---|---|
| +0 | -1 | math/py-numpy/Makefile |
| +0 | -1 | 1 files |
gcc14-darwin: Back to dynamic PLIST. Can't use static like we do on SunOS as this retains fixincludes which differs across OS releases, and that's just too much effort.
| Delta | File | |
|---|---|---|
| +0 | -1,505 | lang/gcc14-darwin/PLIST |
| +7 | -3 | lang/gcc14-darwin/Makefile |
| +7 | -1,508 | 2 files |