NetBSD/pkgsrc AQjZmq1doc CHANGES-2026

   doc: Updated biology/molsketch to 0.8.4nb6
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NetBSD/pkgsrc eA7iadubiology/molsketch Makefile

   biology/molsketch: revbump for openbabel
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NetBSD/pkgsrc 0SmreLsbiology/openbabel PLIST

   Add back PLIST option
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+2-11 files

NetBSD/pkgsrc-wip 9026f96openbabel PLIST Makefile, openbabel/patches patch-CMakeLists.txt patch-tools_CMakeLists.txt

openbabel: remove update candidate
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+0-24openbabel/patches/patch-CMakeLists.txt
+0-18openbabel/buildlink3.mk
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+0-15openbabel/patches/patch-tools_CMakeLists.txt
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NetBSD/pkgsrc 9WXQnhwdoc CHANGES-2026 TODO

   doc: Updated biology/openbabel to 3.2.0
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NetBSD/pkgsrc azrVcawbiology/openbabel PLIST distinfo, biology/openbabel/patches patch-CMakeLists.txt patch-tools_CMakeLists.txt

   biology/openbabel: update to 3.2.0

   This release reflects the latest stable version, including multiple feature enhancements and many, many bug fixes. It is backwards compatible with 3.0 and 3.1.

   We anticipate more bug-fix releases over the course of 2026 and appreciate the many contributions and reports from everyone.
   Major Features and Fixes

       Many memory and crash bugs fixed, thanks to OSS-Fuzz (Google) for infrastructure, including Cisco TALOS, Trail of Bits, ADA Logics, and Claude Mythos for bug reports. At the moment, all reported bugs are fixed.
       L-BFGS optimizer added to OBForceField (internal LBFGS.h); gen3d and conformer search now use L-BFGS by default (with CG fallback when Eigen is unavailable). @ghutchis (#2933)
       New macrocycle ring builder with Dale codes for cycloalkanes with n > 24, plus a post-pass crown builder for unmatched rings up to n ≤ 24. Substantially improves initial 3D geometry for macrocycles. @ghutchis (#2923)
       Distance-geometry improvements: faster, vectorized implementation ensuring stereochemistry is preserved @ghutchis (#2896, #2897)
       KET format (Ketcher JSON) read/write, including aromatic-bond preservation and alias expansion for clean round-trip. @romanbsd (#2909)
       ChemicalJSON (.cjson) format support — Avogadro's native format — with rich metadata: total charge & spin multiplicity, NMR and electronic spectra, conformer energies, unit-cell vectors, and space-group info. @ghutchis (#2486, #2491, #2516, #2640, #2654)
       InChI bumped to 1.07.5; library version now reported in the format description. @e-kwsm @ghutchis (#2857, #2947)
       Python 2 dropped; Python 3.13 supported (distutils removed). @e-kwsm @chrisjonesBSU (#2924, #2809) Integrated PyPI binary wheels @njzjz #2925
       CMake 4 compatibility, FindPython refactor, Eigen 2 dropped, Eigen3::Eigen imported target adopted. @PPN-SD @e-kwsm (#2784, #2753, #2858)
       OBRandomMT: new std::mt19937_64-based PRNG wrapper (opt-in via USE_RANDOMMT, default on); OB_RANDOM_SEED environment variable documented for reproducibility. @e-kwsm (#2241)

   New Features and Improvements

    [74 lines not shown]
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NetBSD/pkgsrc 0phQi4bdoc TODO CHANGES-2026

   doc: Updated textproc/rumdl to 0.2.20
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NetBSD/pkgsrc o2Y5q5wtextproc/rumdl distinfo Makefile

   textproc/rumdl: update to 0.2.20

   This is an update over six releases. For changes please see upstream changelog.
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1.37+2-2textproc/rumdl/Makefile
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NetBSD/pkgsrc eHH3Ruadoc CHANGES-2026

   doc: Updated devel/mise to 2026.6.12
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NetBSD/pkgsrc qhTx4g5devel/mise distinfo cargo-depends.mk

   devel/mise: update to 2026.6.12

   This is an update over nine releases. For changes please see upstream changelog.
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1.114+49-57devel/mise/cargo-depends.mk
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NetBSD/pkgsrc hvSuS8ndoc CHANGES-2026

   Updated misc/indi, misc/py-tqdm
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NetBSD/pkgsrc omSQlHVmisc/py-tqdm distinfo Makefile

   py-tqdm: updated to 4.68.3

   4.68.3

   utils: delay os.get_terminal_size
   autonotebook: support QtConsole, Spyder, JupyterLite
   minor docs updates
   fix typo
   use git-fame
   misc minor framework updates
   fix & update CI build
   pre-commit: add docs & metadata generation
   move tox.ini -> pyproject.toml, move tox-gh-actions -> tox-gh
   add Python 3.14, drop 3.7 support
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NetBSD/pkgsrc g1hHiTPmisc/indi PLIST distinfo

   indi: updated to 2.2.3.1

   2.2.3

   SVBONYPowerBox: Enhance handshake process with debug logging and retry mechanism
   Driver Improvements Pegasus Flatmaster Neo
   Add MX-HD telescope driver
   driverio: Fix multi-device BLOB interleave crash in unix IO path
   simulators: extract shared rendering into SkyRenderer
   cmake: enable FIX_WARNINGS by default
   wake_on_lan, lx200_10micron: replace raw socket WoL with wakeonlan
   V4L2: Apply software binning after frame stacking
   lx200_10micron: add shutdown command, guard behind parked state
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1.19+4-4misc/indi/distinfo
1.35+3-2misc/indi/Makefile
+13-113 files

NetBSD/src BQE6QO4sys/arch/evbppc/sam460ex autoconf.c machdep.c, sys/arch/powerpc/ibm4xx/pci pciex.c

   Fix PCI Express issues on Sam460ex.
   - Mapping memory region for DMA through bus_dma framework with coherency
     requested now causes the region to be uncached for 440 cores.
   - DMA inbound window mapping
   - Avoid configuration cycles that stall the bus
   - Board-specific interrupt mapping

   Now mpt in PCI Express x4 slot does around 100MB/s to a spinning rust
   hard drive and is stable.
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1.59+22-6sys/arch/powerpc/powerpc/bus_dma.c
1.4+12-8sys/arch/powerpc/include/ibm4xx/amcc460ex.h
1.4+13-2sys/arch/evbppc/sam460ex/autoconf.c
1.13+8-1sys/arch/powerpc/include/ibm4xx/vmparam.h
1.6+6-2sys/arch/evbppc/sam460ex/machdep.c
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+140-508 files

NetBSD/pkgsrc 65N3nGcdoc CHANGES-2026

   Updated multimedia/gstreamer1, mail/py-checkdmarc, www/py-httpbin
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NetBSD/pkgsrc imOg29Lwww/py-httpbin distinfo Makefile

   py-httpbin: updated to 0.10.4

   0.10.4

   Made flasgger an optional dependency (falls back to a static landing page when absent), thanks @AdamWill and @mgorny
   Fixed invalid escape sequence SyntaxWarnings on Python 3.12+, thanks @hseg
   Included tox.ini and the tests in the source distribution, thanks @Mirochill
   Added Python 3.13 and 3.14 to the test matrix and classifiers
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1.13+4-4www/py-httpbin/distinfo
1.22+3-4www/py-httpbin/Makefile
+7-82 files

NetBSD/pkgsrc uDW2BfAmail/py-checkdmarc distinfo Makefile

   py-checkdmarc: updated to 5.17.1

   5.17.1

   Fixed

   Accept uppercase SPF macro letters (e.g. %{S}), which are valid per RFC 7208 section 7.3

   5.17.0

   Added

   Warnings for deprecated Sender ID TXT records

   Changed

   NXDOMAIN errors are more detailed
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1.33+2-2mail/py-checkdmarc/Makefile
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NetBSD/pkgsrc Yk0vKwymultimedia/gst-plugins1-bad distinfo, multimedia/gst-plugins1-base distinfo

   gstreamer1: updated to 1.28.4

   GStreamer 1.28.4 stable bug fix release

   Highlighted bugfixes:

   Various security fixes and playback fixes
   audioaggregator: fixes for conversion of in-progress buffers when input caps change
   audioresample: more armv7 fixes
   camerabin: Fix caps negotiation failure when starting video capture
   Debug logging performance improvements
   fmp4mux: Fix draining in chunk mode after partial GOPs were drained
   gldownload: fix handling of directly imported dmabufs from glupload
   matroskamux: Write ReferenceBlock for non-keyframe video in BlockGroups
   rtp2: session: add "stats" property
   rtspsrc2: handle parse errors with TCP interleaved more gracefully where the server just drops data
   rtspsrc2: implement support for SRTP, authentication, HTTP tunnelling, keep alive, stream selection, TLS validation, latency configuration
   st2038combiner: only forward video pad segment, fixing issues for cases where the ST2038 segment differs
   Wavpack audio: Various channel and channel-mask related fixes

    [6 lines not shown]
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1.77+4-4multimedia/gst-plugins1-bad/distinfo
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1.41+4-4multimedia/gst-plugins1-editing-services/distinfo
1.81+4-4multimedia/gst-plugins1-good/distinfo
1.76+4-4multimedia/gst-plugins1-ugly/distinfo
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+40-4212 files

NetBSD/pkgsrc dqbbySCdoc CHANGES-2026

   doc: Updated devel/ast-grep to 0.44.0
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NetBSD/pkgsrc zqB4sbpdevel/ast-grep distinfo cargo-depends.mk

   devel/ast-grep: update to 0.44.0

       chore: move outline docs and benchmarks out of repo #2763
       chore(deps): update dependency smol-toml to v1.7.0 #2762
       Add JavaScript outline rules and stream JSON files #2761
       fix: reject root multi-metavariable patterns #2727
       fix: don't leak metavar bindings across siblings in nthChild ofRule #2677
       fix: extract python from-import modules in outline #2758
       fix: match go outline types by declaration #2759
       fix: skip empty files in outline #2757
       feat: mark duplicate outline names #2756
       refactor: inline outline member kind lookup #2755
       refactor: make outline extract return iterator #2754
       refactor: stream outline extraction items #2753
       perf: use single traversal for outline extraction #2751
       perf: cache transform replace regexes #2750
       fix: don't leak metavar bindings from a negated not rule #2676
       refactor: fold outline extract options into extractors #2749
       refactor: split outline extract options and style #2748

    [60 lines not shown]
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1.79+16-15devel/ast-grep/cargo-depends.mk
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NetBSD/pkgsrc OIPsZI5doc CHANGES-2026 TODO

   Updated audio/strawberry, math/fast_float
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+4-32 files

NetBSD/pkgsrc 5cn8gQsmath/fast_float distinfo Makefile

   fast_float: updated to 8.2.10

   8.2.10
   Int overflow check with a faster approach
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NetBSD/pkgsrc-wip 39b01a3llama.cpp distinfo Makefile.common, py-gguf distinfo

llama.cpp: update to b9756
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NetBSD/pkgsrc Djs2p8yaudio/strawberry distinfo Makefile

   strawberry: updated to 1.2.20

   1.2.20 (2026.06.21):

   Bugfixes:
     * Defer writing playcount and rating tags for the currently playing MP3 file to prevent playback issues
     * Fixed volume being reset during gapless playback when the sample rate changes between tracks
     * Prevent duplicate songs with identical URL
     * Fixed album shuffle to use the effective album artist
     * Fixed collection watcher skipping symlinked directories
     * Fixed collection subdirectory path handling when renaming directories
     * Fixed songlyrics.com, elyrics.net and letras lyrics parsing
     * Fixed SPC (GME) file parsing
     * Fixed Tidal session not being cleared on authentication errors
     * Fixed global shortcuts to use the first backend that registers successfully
     * Prefer the volume UUID when identifying removable devices
     * Save settings when the session manager requests a commit
     * Set StartupWMClass in the desktop file to org.strawberrymusicplayer.strawberry
     * Fixed two tabs closed when middle clicking on a playlist tab

    [16 lines not shown]
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NetBSD/pkgsrc-wip e442e32freecad Makefile

freecad: remove references to non-existent files
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+1-21 files

NetBSD/pkgsrc RpmedSZdoc CHANGES-2026 TODO

   Updated textproc/pugixml, devel/py-pygit2
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NetBSD/pkgsrc yZ2noA1devel/py-pygit2 distinfo Makefile

   py-pygit2: updated to 1.19.3

   1.19.3

   - Memory fixes
   - Fix `Repository.ident`
   - Build/CI fixes and updates
   - Documentation and annotation fixes
   - Add `AGENTS.md` file generated by Kimi-k2.6
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1.49+2-2devel/py-pygit2/Makefile
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NetBSD/pkgsrc YexvK7Ktextproc/pugixml distinfo Makefile

   pugixml: updated to 1.16

   1.16

   Add xml_node::ensure_child and xml_node::ensure_attribute that return the child/attribute with the specified name, adding one if it does not exist
   PUGIXML_CHARCONV_FLOAT option can be enabled to switch floating point conversions to <charconv>, making conversions locale-independent and improving performance
   Several performance improvements (XPath queries, node/attribute lookup) and bug fixes (remove_child stack overflow, load_file integer overflow on 32-bit systems)
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1.18+2-2textproc/pugixml/Makefile
+6-62 files

NetBSD/pkgsrc-wip bb2c0b4py-pivy Makefile

py-pivy: add missing dependencies
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+2-01 files

NetBSD/pkgsrc v9OCE9wdoc CHANGES-2026 TODO

   Updated devel/py-ruff, devel/py-dulwich
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