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math/metis: Mark deprecated

(cherry picked from commit fc16946044547164c69690cb9a1f568d9fc9cc41)

math/metis: Mark deprecated

games/memonix: Fix building with CMake 4

Approved by:    portmgr (fixit blanket)

news/inn-current: Update to 20260912

misc/R-cran-xfun: Update to 0.61

Changelog: https://github.com/yihui/xfun/releases/tag/v0.61

deskutils/xdg-desktop-portal: Fix building on FreeBSD 15.0

Unlike 14.5 it doesn't have strdupa

PR:             298674

lang/bun: fix fetch with new do-fetch.sh                                                                                                                                                                                                  

biology/gatk: fix fetch with new do-fetch.sh                                                                                                                                                                             

audio/abx: update 0.1 → 0.2.1

audio/essentia: update 2.1_beta5-1417 → 2.1.b5.1452

cad/openvsp: Remove math/eigen5 as RUN_DEPENDENCY

It is actually a BUILD_DEPENDENCY

PR:     298505

devel/R-cran-diffobj: Update to 0.3.9

Changelog: https://cran.r-project.org/web/packages/diffobj/news/news.html

net/rsync: enable amd64 SIMD optimizations

PR:             297905
Reported by:    naddy

devel/aws-crt-cpp: Update to 0.43.7

ChangeLog: https://github.com/awslabs/aws-crt-cpp/releases/tag/v0.43.7

devel/aws-c-s3: Update to 1.1.2

ChangeLog: https://github.com/awslabs/aws-c-s3/releases/tag/v1.1.2

net/netatalk4: Add missing dependencies

textproc/py-regex: Fix LICENSE

- While I'm here, add LICENSE_FILE

from pyproject.toml:
license = "Apache-2.0 AND CNRI-Python"
license-files = ["LICENSE.txt"]

Approved by:    portmgr (blanket)
Reference:      https://github.com/mrabarnett/mrab-regex/blob/hg/pyproject.toml#L13-L14

converters/py-rencode: Update to 1.0.9

Changes:        https://github.com/aresch/rencode/releases

security/p5-Crypt-OpenSSL-RSA: Update to 0.33

Changes:        https://metacpan.org/dist/Crypt-OpenSSL-RSA/changes

www/rubygem-em-twitter: Fix gemspec for rubygem-simple_oauth 1.0.0 update

- Bump PORTREVISION for package change

net/rubygem-twitter: Fix gemspec for rubygem-simple_oauth 1.0.0 update

- Bump PORTREVISION for package change

sysutils/rubygem-parallel: Update to 2.2.0

Changes:        https://github.com/grosser/parallel/blob/master/CHANGELOG.md

net/rubygem-simple_oauth: Update to 1.0.0

Changes:        https://github.com/laserlemon/simple_oauth/blob/master/CHANGELOG.md

math/rubygem-bigdecimal: Update to 4.1.3

Changes:        https://github.com/ruby/bigdecimal/releases

devel/rubygem-tzinfo-data: Update to 1.2026.4

Changes:        https://github.com/tzinfo/tzinfo-data/releases

devel/rubygem-google-apis-cloudresourcemanager_v3: Update to 0.64.0

Changes:        https://github.com/googleapis/google-api-ruby-client/blob/main/generated/google-apis-cloudresourcemanager_v3/CHANGELOG.md

devel/rubygem-google-apis-cloudresourcemanager_v2: Update to 0.38.0

Changes:        https://github.com/googleapis/google-api-ruby-client/blob/main/generated/google-apis-cloudresourcemanager_v2/CHANGELOG.md

devel/rubygem-google-apis-admin_directory_v1: Update to 0.81.0

Changes:        https://github.com/googleapis/google-api-ruby-client/blob/main/generated/google-apis-admin_directory_v1/CHANGELOG.md

devel/rubygem-async: Update to 2.46.0

Changes:        https://github.com/socketry/async/releases
                https://github.com/socketry/async/blob/main/releases.md
                https://socketry.github.io/async/releases/

devel/rubygem-aws-sdk-sagemaker: Update to 1.393.0

Changes:        https://github.com/aws/aws-sdk-ruby/blob/version-3/gems/aws-sdk-sagemaker/CHANGELOG.md