devel/py-orjson: Update to 3.11.4
* Switch to PyPI because it's the preferred source for Python ports.
* Remove USE_PYTHON=cython instead of setting it to USE_PYTHON=cython3,
because Cython is not needed at all. [1]
* Strip shared library.
Changelog since 3.10.15:
https://github.com/ijl/orjson/blob/3.11.4/CHANGELOG.md
PR: 291423, 289075 [1]
Approved by: Ivan Rozhuk (maintainer)
devel/root: Update to 6.38/00
New port options:
FFTW3 (OFF), GEOM (ON), UNFOLD (ON)
Renamed port options (now using same namings as upstream):
FITS->FITSIO, TMLP->MLP, TMVAML->TMVA
Removed port options (following upstream):
MYSQL, PGSQL
In addition, MATHMORE is no longer a default option.
It has otherwise been a default option in the ports tree until
now, unlike upstream.
ChangeLog: https://root.cern/doc/v638/release-notes.html
PR: 291434
ports-mgmt/poudriere-dsh2dsh: Update 3.4.99.20251128 => 3.4.99.20251206
Upstream changes:
- testport: Fix testing of an IGNORE/BROKEN port.
- bulk/testport SIGINFO: Avoid error if trap starts with set -u.
- jail -d: Don't try destroyfs if JAILMNT is not set
- Revert "testport/bulk -t: Make stage-qa library dependencies check fatal."
This reverts the PROXYDEPS_FATAL=yes change.
PR: 291464
databases/mongodb-tools: unpin go version
Dodges the deprecation.
Unfortunately the tests fail if go.mod does not match the go pkg
version. Documented this in the Makefile.
Fixes: f45b1d07f50b64cebbcd416af8d7ddf265db3de1 "many: Unsupported Go dep; deprecate and schedule for removal"
biology/snpeff: Mark BROKEN and set expiration date to 2026-01-31
snpeff.blob.core.windows.net does not resolve
Possible new home (and version), https://pcingola.github.io/SnpEff/
PR: 291170
Approved by: blanket